Commit af1a6f65 authored by Rane Squires's avatar Rane Squires

Update bioinformatics.yml to include new packages

parent 946188c7
Pipeline #140 canceled with stages
name: bioinformatics name: bioinformatics
channels: channels:
- faircloth-lab
- qiime2/label/r2019.7 - qiime2/label/r2019.7
- anaconda - anaconda
- conda-forge - conda-forge
...@@ -14,6 +15,8 @@ dependencies: ...@@ -14,6 +15,8 @@ dependencies:
- atomicwrites=1.3.0=py_0 - atomicwrites=1.3.0=py_0
- attrs=19.1.0=py_0 - attrs=19.1.0=py_0
- backcall=0.1.0=py_0 - backcall=0.1.0=py_0
- bcftools=1.9=h68d8f2e_9
- bedtools=2.29.0=hc088bd4_3
- bibtexparser=1.1.0=py_0 - bibtexparser=1.1.0=py_0
- binutils_impl_linux-64=2.31.1=h6176602_1 - binutils_impl_linux-64=2.31.1=h6176602_1
- binutils_linux-64=2.31.1=h6176602_8 - binutils_linux-64=2.31.1=h6176602_8
...@@ -43,14 +46,15 @@ dependencies: ...@@ -43,14 +46,15 @@ dependencies:
- boost=1.68.0=py36h8619c78_1001 - boost=1.68.0=py36h8619c78_1001
- boost-cpp=1.68.0=h11c811c_1000 - boost-cpp=1.68.0=h11c811c_1000
- bowtie=1.2.0=py36_0 - bowtie=1.2.0=py36_0
- bowtie2=2.3.5=py36he860b03_0
- bwa=0.7.17=hed695b0_6 - bwa=0.7.17=hed695b0_6
- bwidget=1.9.11=0 - bwidget=1.9.11=0
- bz2file=0.98=py_0 - bz2file=0.98=py_0
- bzip2=1.0.8=h516909a_1 - bzip2=1.0.8=h516909a_1
- ca-certificates=2019.9.11=hecc5488_0 - ca-certificates=2019.11.28=hecc5488_0
- cachecontrol=0.12.5=py_0 - cachecontrol=0.12.5=py_0
- cairo=1.16.0=h18b612c_1001 - cairo=1.16.0=h18b612c_1001
- certifi=2019.9.11=py36_0 - certifi=2019.11.28=py36_0
- cffi=1.12.3=py36h8022711_0 - cffi=1.12.3=py36h8022711_0
- chardet=3.0.4=py36_1003 - chardet=3.0.4=py36_1003
- click=7.0=py_0 - click=7.0=py_0
...@@ -248,6 +252,7 @@ dependencies: ...@@ -248,6 +252,7 @@ dependencies:
- pixman=0.38.0=h516909a_1003 - pixman=0.38.0=h516909a_1003
- plink=1.90b6.12=heea4ae3_0 - plink=1.90b6.12=heea4ae3_0
- pluggy=0.12.0=py_0 - pluggy=0.12.0=py_0
- prinseq=0.20.4=4
- prometheus_client=0.7.1=py_0 - prometheus_client=0.7.1=py_0
- prompt_toolkit=2.0.9=py_0 - prompt_toolkit=2.0.9=py_0
- psutil=5.6.3=py36h516909a_0 - psutil=5.6.3=py36h516909a_0
...@@ -354,6 +359,7 @@ dependencies: ...@@ -354,6 +359,7 @@ dependencies:
- scikit-bio=0.5.5=py36h3010b51_1000 - scikit-bio=0.5.5=py36h3010b51_1000
- scikit-learn=0.21.2=py36hcdab131_1 - scikit-learn=0.21.2=py36hcdab131_1
- scipy=1.3.2=py36h921218d_0 - scipy=1.3.2=py36h921218d_0
- scythe=0.992=0
- seaborn=0.9.0=py_2 - seaborn=0.9.0=py_2
- send2trash=1.5.0=py_0 - send2trash=1.5.0=py_0
- setuptools=41.0.1=py36_0 - setuptools=41.0.1=py36_0
......
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