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rsquires-anaconda
Commit a718e997 authored by Joe Hause's avatar Joe Hause
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Merge branch 'development' into 'master' 

Development

See merge request !14
parents 9267b834 01af646d
Pipeline #146 failed with stages
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      manifests/environments.pp
      View file @ a718e997
      ...@@ -56,11 +56,11 @@ class anaconda::environments { ...@@ -56,11 +56,11 @@ class anaconda::environments {
      } }
      #exec { 'setupbioinformatics': #exec { 'setupbioinformatics':
      # unless => "conda env list | grep -q '/opt/anaconda/envs/bioinformatics'", # unless => "conda env list | grep -q '/opt/anaconda/envs/bioinformatics'",
      # command => 'conda env create -f /opt/envs/bioinformatics.yml', # command => 'conda env create -f /opt/envs/bioinformatics.yml',
      # environment => ["SHELL=/bin/bash"], # environment => ["SHELL=/bin/bash"],
      # require => File['/opt/envs/bioinformatics.yml'], # require => File['/opt/envs/bioinformatics.yml'],
      # path => ['/bin','/opt/anaconda/bin'] # path => ['/bin','/opt/anaconda/bin']
      #} #}
      } }
      manifests/update.pp
      View file @ a718e997
      ...@@ -9,8 +9,9 @@ class anaconda::update { ...@@ -9,8 +9,9 @@ class anaconda::update {
      exec { 'updateconda': exec { 'updateconda':
      command => 'conda update conda -yq', command => 'conda update conda -yq',
      environment => ["SHELL=/bin/bash"], environment => ['SHELL=/bin/bash'],
      path => ['/opt/anaconda/bin',], path => ['/opt/anaconda/bin',],
      provider => shell,
      schedule => 'daily', schedule => 'daily',
      } }
      } }
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