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files/bioinformatics.yml

+name: bioinformatics
+channels:
+- conda-forge
+- bioconda
+- defaults
+dependencies:
+- bowtie=1.2.3=py37hc9558a2_0
+- dinopy=2.0.1=py37h6bb024c_1
+- fastqc=0.11.8=1
+- insilicoseq=1.4.3=py_0
+- libdeflate=1.0=h14c3975_1
+- pysam=0.15.3=py37hda2845c_1
+- simlord=1.0.3=pyh24bf2e0_2
+- spades=3.13.1=h2d02072_2
+- asn1crypto=0.24.0=py37_1003
+- biopython=1.74=py37h516909a_0
+- bzip2=1.0.8=h516909a_1
+- cffi=1.12.3=py37h8022711_0
+- chardet=3.0.4=py37_1003
+- cryptography=2.7=py37h72c5cf5_0
+- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
+- future=0.17.1=py37_1000
+- idna=2.8=py37_1000
+- joblib=0.13.2=py_0
+- libssh2=1.8.2=h22169c7_2
+- llvm-openmp=8.0.1=hc9558a2_0
+- openjdk=11.0.1=h516909a_1016
+- openmp=8.0.1=0
+- perl=5.26.2=h516909a_1006
+- pycparser=2.19=py37_1
+- pyopenssl=19.0.0=py37_0
+- pysocks=1.7.0=py37_0
+- requests=2.22.0=py37_1
+- tbb=2019.8=hc9558a2_0
+- urllib3=1.25.3=py37_0
+- _libgcc_mutex=0.1=main
+- blas=1.0=mkl
+- ca-certificates=2019.5.15=1
+- certifi=2019.6.16=py37_1
+- curl=7.62.0=hbc83047_0
+- cycler=0.10.0=py37_0
+- dbus=1.13.6=h746ee38_0
+- expat=2.2.6=he6710b0_0
+- fontconfig=2.13.0=h9420a91_0
+- freetype=2.9.1=h8a8886c_1
+- glib=2.56.2=hd408876_0
+- gst-plugins-base=1.14.0=hbbd80ab_1
+- gstreamer=1.14.0=hb453b48_1
+- icu=58.2=h9c2bf20_1
+- intel-openmp=2019.5=281
+- jpeg=9b=h024ee3a_2
+- kiwisolver=1.1.0=py37he6710b0_0
+- libcurl=7.62.0=h20c2e04_0
+- libedit=3.1.20181209=hc058e9b_0
+- libffi=3.2.1=hd88cf55_4
+- libgcc-ng=9.1.0=hdf63c60_0
+- libgfortran-ng=7.3.0=hdf63c60_0
+- libpng=1.6.37=hbc83047_0
+- libstdcxx-ng=9.1.0=hdf63c60_0
+- libuuid=1.0.3=h1bed415_2
+- libxcb=1.13=h1bed415_1
+- libxml2=2.9.9=hea5a465_1
+- matplotlib=3.1.1=py37h5429711_0
+- mkl=2019.5=281
+- mkl-service=2.3.0=py37he904b0f_0
+- mkl_fft=1.0.14=py37ha843d7b_0
+- mkl_random=1.0.2=py37hd81dba3_0
+- ncurses=6.1=he6710b0_1
+- numpy=1.16.5=py37h7e9f1db_0
+- numpy-base=1.16.5=py37hde5b4d6_0
+- openssl=1.1.1d=h7b6447c_1
+- pandas=0.25.1=py37he6710b0_0
+- patsy=0.5.1=py37_0
+- pcre=8.43=he6710b0_0
+- pip=19.2.2=py37_0
+- pyparsing=2.4.2=py_0
+- pyqt=5.9.2=py37h05f1152_2
+- python=3.7.4=h265db76_1
+- python-dateutil=2.8.0=py37_0
+- pytz=2019.2=py_0
+- qt=5.9.7=h5867ecd_1
+- readline=7.0=h7b6447c_5
+- scipy=1.3.1=py37h7c811a0_0
+- seaborn=0.9.0=py37_0
+- setuptools=41.0.1=py37_0
+- sip=4.19.8=py37hf484d3e_0
+- six=1.12.0=py37_0
+- sqlite=3.29.0=h7b6447c_0
+- statsmodels=0.10.1=py37hdd07704_0
+- tk=8.6.8=hbc83047_0
+- tornado=6.0.3=py37h7b6447c_0
+- wheel=0.33.4=py37_0
+- xz=5.2.4=h14c3975_4
+- zlib=1.2.11=h7b6447c_3
+prefix: /opt/miniconda/envs/bioinformatics
+