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Rane Squires
rsquires-anaconda
Commits
9267b834
Commit
9267b834
authored
Dec 03, 2019
by
Rane Squires
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Merge branch 'patch-1' into 'master'
Update bioinformatics.yml to add new packages See merge request
!15
parents
229e5353
5a85c90f
Pipeline
#143
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files/bioinformatics.yml
View file @
9267b834
name
:
bioinformatics
name
:
bioinformatics
channels
:
channels
:
-
faircloth-lab
-
qiime2/label/r2019.7
-
qiime2/label/r2019.7
-
anaconda
-
anaconda
-
conda-forge
-
conda-forge
...
@@ -14,6 +15,8 @@ dependencies:
...
@@ -14,6 +15,8 @@ dependencies:
-
atomicwrites=1.3.0=py_0
-
atomicwrites=1.3.0=py_0
-
attrs=19.1.0=py_0
-
attrs=19.1.0=py_0
-
backcall=0.1.0=py_0
-
backcall=0.1.0=py_0
-
bcftools=1.9=h68d8f2e_9
-
bedtools=2.29.0=hc088bd4_3
-
bibtexparser=1.1.0=py_0
-
bibtexparser=1.1.0=py_0
-
binutils_impl_linux-64=2.31.1=h6176602_1
-
binutils_impl_linux-64=2.31.1=h6176602_1
-
binutils_linux-64=2.31.1=h6176602_8
-
binutils_linux-64=2.31.1=h6176602_8
...
@@ -43,14 +46,15 @@ dependencies:
...
@@ -43,14 +46,15 @@ dependencies:
-
boost=1.68.0=py36h8619c78_1001
-
boost=1.68.0=py36h8619c78_1001
-
boost-cpp=1.68.0=h11c811c_1000
-
boost-cpp=1.68.0=h11c811c_1000
-
bowtie=1.2.0=py36_0
-
bowtie=1.2.0=py36_0
-
bowtie2=2.3.5=py36he860b03_0
-
bwa=0.7.17=hed695b0_6
-
bwa=0.7.17=hed695b0_6
-
bwidget=1.9.11=0
-
bwidget=1.9.11=0
-
bz2file=0.98=py_0
-
bz2file=0.98=py_0
-
bzip2=1.0.8=h516909a_1
-
bzip2=1.0.8=h516909a_1
-
ca-certificates=2019.
9.11
=hecc5488_0
-
ca-certificates=2019.
11.28
=hecc5488_0
-
cachecontrol=0.12.5=py_0
-
cachecontrol=0.12.5=py_0
-
cairo=1.16.0=h18b612c_1001
-
cairo=1.16.0=h18b612c_1001
-
certifi=2019.
9.11
=py36_0
-
certifi=2019.
11.28
=py36_0
-
cffi=1.12.3=py36h8022711_0
-
cffi=1.12.3=py36h8022711_0
-
chardet=3.0.4=py36_1003
-
chardet=3.0.4=py36_1003
-
click=7.0=py_0
-
click=7.0=py_0
...
@@ -248,6 +252,7 @@ dependencies:
...
@@ -248,6 +252,7 @@ dependencies:
-
pixman=0.38.0=h516909a_1003
-
pixman=0.38.0=h516909a_1003
-
plink=1.90b6.12=heea4ae3_0
-
plink=1.90b6.12=heea4ae3_0
-
pluggy=0.12.0=py_0
-
pluggy=0.12.0=py_0
-
prinseq=0.20.4=4
-
prometheus_client=0.7.1=py_0
-
prometheus_client=0.7.1=py_0
-
prompt_toolkit=2.0.9=py_0
-
prompt_toolkit=2.0.9=py_0
-
psutil=5.6.3=py36h516909a_0
-
psutil=5.6.3=py36h516909a_0
...
@@ -354,6 +359,7 @@ dependencies:
...
@@ -354,6 +359,7 @@ dependencies:
-
scikit-bio=0.5.5=py36h3010b51_1000
-
scikit-bio=0.5.5=py36h3010b51_1000
-
scikit-learn=0.21.2=py36hcdab131_1
-
scikit-learn=0.21.2=py36hcdab131_1
-
scipy=1.3.2=py36h921218d_0
-
scipy=1.3.2=py36h921218d_0
-
scythe=0.992=0
-
seaborn=0.9.0=py_2
-
seaborn=0.9.0=py_2
-
send2trash=1.5.0=py_0
-
send2trash=1.5.0=py_0
-
setuptools=41.0.1=py36_0
-
setuptools=41.0.1=py36_0
...
...
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